1:BUILD_BY[name] student1 1:BUILD_ENVIRONMENT[operating system 32 vs 64] Ubuntu 64 1:DEPENDENCIES[list of dependencies with where to get them] 1. gcc 1:END_DEPENDENCIES 1:NOTES[notes on attempted build] student5 - When I run make: model.cpp: In static member function ‘static unsigned int AlignerModel::getFreeMemory()’: model.cpp:166:47: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] model.cpp:167:45: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] model.cpp:168:47: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] model.cpp:169:45: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] main.cpp: In function ‘void mergeFiles(std::string)’: main.cpp:273:26: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] main.cpp:278:28: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] aligner.cpp: In member function ‘AlignRes Aligner::mergePairEnd(AlignInfo*, int, char*)’: aligner.cpp:2002:20: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] aligner.cpp:2004:20: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] aligner.cpp: In member function ‘AlignRes Aligner::mergeSingleEnd(AlignInfo*, int, char*)’: aligner.cpp:1860:20: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] g++ -lpthread -o wham sequence.o hash.o embedhash.o main.o aligner.o interval.o edit_distance.o error.o short.o hitset.o model.o perfcounters.o writer.o g++ -lpthread -o wham-build sequence.o hash.o embedhash.o builder.o aligner.o interval.o edit_distance.o error.o short.o hitset.o model.o perfcounters.o writer.o main.o: In function `align(char*, AlignInfo*, char*, int)': main.cpp:(.text+0x1af8): undefined reference to `pthread_create' main.cpp:(.text+0x1bf8): undefined reference to `pthread_join' collect2: ld returned 1 exit status make: *** [wham] Error 1 student1 - make command returns an error: student1@ubuntu:~/Downloads/builds/tods37/LiPT12/wham$ sudo make [sudo] password for student1: g++ -c -O3 -Wno-write-strings hash.cpp hash.cpp: In member function ‘int HashTable::preProcessEnd()’: hash.cpp:193:27: internal compiler error: Aborted Please submit a full bug report, with preprocessed source if appropriate. See for instructions. Preprocessed source stored into /tmp/ccFq1gSg.out file, please attach this to your bugreport. make: *** [hash.o] Error 1 1:END_NOTES VERIFY:ANALYSIS_BY[name] VERIFY:STATUS[unknown,needed,not_needed,started,finished] unknown VERIFY:COMMENT[string]